set encoding iso_8859_1
set term pdf enhanced color dashed size 5in, 4in font "Arial,14"

#set output "rateConstants.pdf"
set output "QfoldingRegion.pdf"
#set xlabel "{/Symbol e}_{ligand}"
set xlabel "C_{Salt} (mM)"
set ylabel "Q_{folding}"
#set ylabel "Populations(%)"
set xtics (0,50,100,150,200,250,300)
#set ytics 500
set xrange [0:400.0]
set yrange [0.0:1.0]
set title "Q_{f} of different secondary structure elements in the unbound state"
#set key left
#set tmargin 2.4
#set arrow 1 from 2.0,0.033 to 2.0,0.087 lw 420 lt 7 lc rgb "grey" nohead
set label "no Charge Interactions" at 310, 0.43 font "Helvetica,10"

#p 'temperature.dat' using 1:2 w lp lw 6 lt 4 lc rgb "yellow" ti"Apo",'' using 1:3 w lp lw 6 lt 5 lc rgb "purple" ti "Open",'' using 1:4 w lp lw 6 lt 6 lc rgb "red" ti "Holo"
p 'QRegions.dat' using 1:2 w lp lw 3 lt 4 lc rgb "blue" ti"{/Symbol a}-helix 1",'' using 1:3 w lp lw 3 lt 5 lc rgb "purple" ti "{/Symbol a}-helix 2",\
 '' using 1:4 w lp lw 3 lt 6 lc rgb "red" ti "{/Symbol b} sheet", 'nocharges.dat' u 1:2 w p pt 8 ps 0.9 lc rgb "green" ti " "
#'' using 1:($5*50) w lp lw 3 lt 7 lc rgb "orange" ti "H-A",\
# '' using 1:($6*50) w lp lw 3 lt 8 lc rgb "green" ti "O-H",'' using 1:($7*50) w lp lw 3 lt 9 lc rgb "blue" ti "H-O"
